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Simulating ocean acidification in the Northeast U.S. region using a fully coupled three-dimensional biogeochemistry and ecosystem model: a dissertation in Marine Science and Technology- Marine and Atmospheric System Modeling and Analysis
Dissertation   Open access

Simulating ocean acidification in the Northeast U.S. region using a fully coupled three-dimensional biogeochemistry and ecosystem model: a dissertation in Marine Science and Technology- Marine and Atmospheric System Modeling and Analysis

Lu Wang
Doctor of Philosophy (PHD), University of Massachusetts Dartmouth
2023
DOI:
https://doi.org/10.62791/19744

Abstract

The Northeast Biogeochemistry and Ecosystem Model (NeBEM) was developed by integrating the Northeast Coastal Ocean Forecast System (NECOFS) with European Regional Seas Ecosystem Model (ERSEM). ERSEM was upgraded to include volume and mass conservation adjustment, total variational diminishing biogeochemical tracer advection scheme, groundwater module, and spatially dependent parameter specifications. NeBEM was first validated through one- and three-dimensional experiments in Massachusetts Bay and then applied to simulate the 2017-2018 physical and biogeochemistry fields in the U.S. region. The model skill assessments demonstrated the NeBEM’s capability of reproducing the seasonal variability of nitrate (𝑁𝑂₃), ammonium (𝑁𝐻₄), silicate (𝑆𝑖𝑂₄), dissolved oxygen (𝐷𝑂), chlorophyll-a (Chl-a), total alkalinity (𝑇𝐴), dissolved inorganic carbon (𝐷𝐼𝐢), 𝑝𝐻, 𝑝𝐢𝑂₂, and aragonite saturation state (𝛺ₐ) in a multi-scale region varying from estuaries to continental shelves. Process-oriented studies suggested that the changes in 𝛺ₐ was predominantly manipulated by 𝐷𝐼𝐢 variability in the Middle Atlantic Bight (MAB) and Georges Bank (GB), and 𝐷𝐼𝐢 plus 𝑇𝐴 in the Gulf of Maine (GOM) and Scotian Shelf (SS). Generally, the tidal-mixed areas, such as the western shelf of Nova Scotia, Fundy Bay, Nantucket Shoals, Long Island Sounds, and estuaries connected to the northern GOM, were most susceptible to the OA. From January to April, the inner shelf, especially near rivers, experienced a period of low 𝛺ₐ (<1.0), with the largest area occurring in March. During this period, the surface 𝐷𝐼𝐢 was increased by 𝐢𝑂₂ loading through the air-sea interface via NEC. Over the outer shelf, the total 𝐷𝐼𝐢 amount was predominantly replenished by the onshore slope-water inflow. The model suggested that warm core rings (WCRs) and eddies (WCEs) played an essential role in enhancing the slope-water transport to the shelf, which accounted for an ~35% increase in the 𝐷𝐼𝐢 flux. The observed data generally fell within the range of the simulated n𝑇𝐴:n𝐷𝐼𝐢 slope. The distribution of simulated n𝑇𝐴:n𝐷𝐼𝐢 ratio varied from region to region. The biogeochemical variability of 𝑇𝐴 and 𝐷𝐼𝐢 was primarily controlled by the nitrification/denitrification process in the GOM and MAB, the air-sea 𝐢𝑂₂ exchange in the open sea (OS), and the multiple biogeochemical processes in SS and GB. The influence of climate change on OA was assessed using NeBEM by 1) considering observational data-projected increases in 𝑆𝑆𝑇, atmospheric 𝐢𝑂₂ loading, and river discharges, and 2) a downscale climate (NCAR-CESEM-BC)-regional (WRF)-NeBEM coupled model. Both approaches consistently show that regional warming will intensify the anticyclonic residual circulation gyre over GB and the cyclonic gyre in Wilkinson Basin but weaken the cyclonic gyre in Jordan Basin. March will still be the highest probability month with the maximum aea of a yearly minimum 𝛺ₐ under changing climate. Increased atmospheric 𝐢𝑂₂ loading against global warming will enlarge yearly minimum 𝛺ₐ area during March by 8% in SS, 3% in the GOM, 18% over GB, and increase the probability of having the minimum 𝛺ₐ to occur earlier. Warming will increase the probability of having the yearly lowest 𝛺ₐ to occur in the bottom layer in the GOM and MAB. Under the climate changes, the primary biogeochemical drivers for 𝑇𝐴 and 𝐷𝐼𝐢 will remain unchanged changed in SS, the GOM, the MAB and OS, even though the contribution of air-sea 𝐢𝑂₂ exchange and NCP will be enhanced. GB is the region with the significant change where the 𝐷𝐼𝐢 biogeochemical variation will be controlled by air-sea 𝐢𝑂₂ exchange.
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Wang L. SMAST PhD Dissertation 202320.07 MBDownloadView
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